Browse of TCMCG006C73860 protein

CDS

Accession Number	TCMCG006C73860
gbkey	CDS
Protein Id	XP_013701683.1
Location	join(19092487..19092662,19092805..19093070,19093158..19093324,19093408..19093624,19093879..19094225,19094617..19094796,19094870..19095005,19095092..19095240,19095398..19095509,19095623..19096194,19096294..19096417,19096505..19096782,19096867..19096977,19097094..19097156,19097309..19097500,19097617..19097676,19097780..19097848,19098080..19098226,19098311..19098430,19098534..19098650,19098782..19098937,19099006..19099068,19099169..19099239,19099502..19099913,19100022..19100124,19100211..19100320,19100442..19100513,19100610..19100685,19100767..19100874,19100956..19101097,19101190..19101255,19101346..19101562,19102667..19102721,19102804..19102895,19102990..19103053,19103149..19103519)
Gene	LOC106405701
GeneID	106405701
Organism	Brassica napus

Protein

Length	1926aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013846229.2
Definition	nuclear pore complex protein GP210 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	UY
Description	Bacterial Ig-like domain (group 2)
KEGG_TC	1.l.1
KEGG_Module	M00427        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03019        [VIEW IN KEGG]
KEGG_ko	ko:K14314        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] map03013        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005635        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005783        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0031967        [VIEW IN EMBL-EBI] GO:0031975        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGTTCGTATCTCATCGTGCTTCTTCGTCGTGGTTCTGGTTCTGCTTTCGATTCGAGAAACTTCGTCGCAGTTAGGTTCTGGTCCGCACATTACCGATGTCAATATACTGTTGCCTCCGAGGATGAAGAATCCAGTAGAGTATCGCCTTCAAGGAAGCGATGGCTGCTTCAAATGGTCATGGGATCATCATGATATTCTCTCGGTTACCCCTGAGTTTAATTCGAGCAGTCACTGCTCCACCAGCGCTCGTCTAAAATCGATTTCGCCTTATAGCGGCAGGAAGGAGACTGCAGTTTACGCCACTGATATACAGACGGGGATGGTGATTCGCTGCAAGGTGTTTATTGACAACTTCTCACGGATTCAGATTTTTCATAACTCTATCAAGCTTGATCTTGATGGACTTTCCATGCTTAGAGTCCGCGCTTTTGATAATGAAGATAACGAGTTCTCCTCACTGGTGGGTCTACAGTTCATGTGGAAGCTAATGCCTGAAAGTGGTGGAACAACGCATCATCTTGCTCATGTCCCTTTGAAGGAATCTCCGTTGACTGACTGTGGGGGACTGTGTGGCTACTTGGATATCCAGAAAAAGCTTGAGGATAGTGGGGTATTTGCAGATTTGTTTGTGGTGAAGGGAACCAAAATTGGACATGAGAAGGTTTCAGTTCATCTGTTGGAAGCTCCCCTTACCCATATAGCCGATGAAATAGTACTAACCGTAGCAGAGGCCATGTCACTTGAACCTCGTTCACCAGTCTATGTCCTAATGGGTGCTTCTTTTGGTTACACTTTAAAGGTCATGCGTGGGAATGTTCCTCAAGCCGTGCAGCTACCATCATCACATCACAGATGGTCTGCGTTGAACTCTTCGGTTGTTCAAGTAGATTCTTTGATTGGTCTGACTAAAGCATTAAGCTTGGGGGTAACAACAGTTGTTGTTGAAGATACCCGGGTTGCTGGACACATTCAAGGATCATCTATTAATGTTGTCACTCCAGATGCTTTTATCTTGTACATATCACCTTGGTCAACGTCAGGGGATCCTACTACAGAATCGAAATCTTTTCCGTCATCTATGCATTGGTATGTGGTCTCTGGTCGTCAATATCTGATGCAGATGAAGATTTTCTCTGGAAGACCTGATGCACATGAAATCTATATAACTGAGAAGGATGATATTAAACTGTACGGAGAAGAGACAGATTATTGGAAAATCGTTTCAGTGCCAGATGATCTTTCCTCTGAATATGGTTGGCGAAATTCTAGAATTTTGAAAGCAATCTCACCAGGATTAGGAGAGCTGACAGCTGCATTGACTTACTTCAATGGACACCAGAATTCAAAAGAGGTTCTCAAGGTTGTCCAAGACATTGTGGTTTGTGAAAAGGTGCAGTTCACGTTGAACAGTGAAGATGACACACCTAAGATTCTACTCCCTTGGACCCCTGCTGTATATCAAGAGATGGAGCTAATTGTGACAGGAGGTTGTGCGAAAGCATCGAGTGACTACAAGTGGTTTACTTCAGATGTGAGCATTTTGTCTGTGTCAGCTTATGGAATTATCCAGGCAAAGAGGCCTGGAATAGCCACTGTAAAGGTGGTGTCGACTTTCGATTCACAAAATTTCGATGAGGTTATTGTTGAAGTTTCCATTCCATCCTCTATGGTTATGTTGCAATACTTTCCAGTAGAGACAGTGGTTGGATCACACCTGCAAGCAGCTGTCACAATGAAGGCTTTAAATGGTGCCTCGTTCTCTAGATGTGATGCTTTCAATTCACTGATAAAGTGGAAGACAGGGAGTGACTCTTTTGTTATAGTTAATGCAACAGCCGAGATGATGATTTTGGAAGAGTTAAGAAGCACGGAGTCCAGTCCTCCTTGTTCTCGGGCTTATATATATACTTCATCTCCTGGCCGCACAGTGCTACAAGCAACTCTGGCTAAAGAGTTCCATTATTTTGATAAGTCGTTAAGCGAATCAATTGATTTGAAAGCAACTTTAAGTATCGGGGCCTATCTGCCACTTACTATCCGACAAGATAGTGATGGGAATCATCATGGTGGATATTGGTTTGATAAGACACGAGAAGAAACTGATATTGGTGTTAGTAACCTCTATCTTGTACCTGGGACATATGTTGATGTGATGCTTCTGGGGGGACCTGAAAGGTGGGATGACAATGTTGAGTTCACCGAGACTGTGACTAAAGTGAATGAAGATGAGGAGGATCTTACAAATGGAGATAACATCCATCACAACTTTGACCATCATGCTAACGTGTTTAGAGTTTCGTGCCAGACGCTTGGTTCTTATAAACTGGTATTCCAGCGTGGAAATCTGGTCGGGGTGGACCATCCTTTACCTGCAGTGGCAGAAGCTTTCTTATCTGTTCAATGCAGCTTACCATCCTCTGTTGTACTCATTGTTGATGAACCTGTTAACAAGCTTAGTGTTATTAGAGCTGCTAGTCAAGCTGAGAGAGCACCAGGACGACTTCGTTTAACTCCTGTGACTGTAGCAAATGGGCAAATAATTCGAGTGGCTGCTGTTGGTATTAGCGACTCTGGAGAAGCCTTTTCAAACTCATCAACTCTTTCACTCAGGTGGGAACTGAGTAGCTGCGACAATTTGGCATCTTGGGACGATGATTATAATTCAAAAATGACAAAGACTAGCTGGGAGAGATTTCTAGCTCTTCGTAATGAATCTGGATTGTGCACTGTCCGGGCTACAGTTTCTGGTATTGATCATTCTGGAAAACCCCTATACTCATCTCTGCTTCCAGAAGTGTCCGAAAGTACTCTCACAGATGCTGTACGCTTACAGTTGGTTTCGACACTAAGAGTCACACCAGAGTTCAACCTGGTGTTTCTCAATCCTAATGCCAAGGTTAATTTGTCAATGACTGGAGGTAGCTGTTTGTGGGAAGCGGTTGTGAATGATTCTCGTGTAGCAGAAGTGATTAGACCCCCATCTGGCCTGCAATGCTCGCAAATGACCCTGTCTCCAAAAGGGTTAGGGACTACACTTGTGACAGTATATGATATTGGGGTCTCTCCTCCACTTTCAGCTCTTGCGGTGATTAAAGTTGCAGACATAGACTGGATAAAAATTGCATCTGGGGACGAGATAAGTATAATGGAAGGAAGTACACACTCCATTGATCTACTGACTGGCATTGACGATGGGACAACCTTTGATTCTTCCCAGTACCCGCTAATGGATATAATGGTGCATATTGAGGATGATCTCGCGGAGCATGTTTCTGTCGATGATAATCCACTTTCTGTTGGTGAACACGTGGCAACTTCTTCATTCAAAGTAGCTGCTAGACGCCTGGGAATCACAACACTATATGTTAGCGCGAGACAACAATCAGGAGATAAAGTGGTGAGCCAAACTATCAAATTGGAAGTTTATGCCCCACCAAGACTTCACCCACAAGGAATATTTCTTGTTCCTGGTGCTTCTTACGTGCTCACTGTTAAAGGAGGCCCAACCATGAATGTTTCTGTTGACTACACAACTGTGGATAACCAAGTTGCTGAGATCGAGAAATCAGGACGCCTCTATGCAACATCACCTGGCAACACGACAATCTATGCAAAAATATATGGGAGTGAAGGTACTGTAGTTTGTGAAGCAGTTGGAAATGCCGAAGTTGGAGTTCCTGCTGCTGCAACGCTGATAGCTCAAAGTGATACTGTGGCTGTTGGCCGTGAAATGCCTATATTTCCATCATTTTCTCAGGTAGATCTTTTGTCTTTCTATGAGCTCTGCAGAGCATACCGATGGACTATCGAAGATGAGGAGGTGTTGAGTTTCCATGTACCGTCTATTGACGTGGAAGAGAATGCTGGCTTTGTCAATGTCGTCCAAGGAAGATCTGCTGGAAAAACCAGAGTCACCATTGCGTTCTCATGTGATTTCGTGTCTCCTGGCTTCTACTCCGAATCTAGAACATACGAAGCATCAATAGTTTTATCCGTTGTGCCTGATCTCCCTCTTTCTCTCGGGGTTCCTATGACCTGGGTTCTTCCGCCATTTTATACGTCATCTAGTCTATTGCCATCATCTCCCGAGACACCAAAGCACAAGGATGGTCAAAGTCACAGAGGCAATGTAGTCTATTCCCTATTGAAAGACTGTAGTTCTCGGGCTGACGTCGAACGAGATACTATATCAATTAACGGCGGAAGCATCAAAACTACAGAAATCAACAATGTTGCATGTATTCAAGCCAAAGACCGCACAAGTGGAAGGATCGAGATTGCTGCTTGTGTGAGGGTTGCAGAGGTTGCTCAAATAAGAATGAAGAGTGAAATGATCCCTTTCCACGTGGTGGATCTTGCTGTTGGTGGTGAACTTGAACTTCCAATAAATTACTATGACACTCTAGGAATCGGTTTTCTAGAAGCACATGGTGTTACTACATACAACGTTGAAACCAATCATCGTGATGTTGTGTCTATTAAGACTGTCAATGACCAAACAAGTGTCTACATTAAGGGAATAAAACATGGTAAAGCTTTAATTCGGGTCTCCATTGGCGGTAATCTGAGGAAAGCAGACTACGTTCTGGTTTCAGTTGGGGCACATATTCATCCTCAAAAACCTGTCATTCACACTGGAAATATGCTGAATTTCAGCGTTACAGGTGCTGATCATCAAGTCTCTGGTCAATGGGTTTCATCGAACAGGAGTGTCCTATCCGTCAATGCAGTATCCGGCCAAGCTAAAGCAATCGGCCAAGGGTCAGCTCACGTTACATTTGAAGGTCATGGTTTGAAGCTGCAAACAAAAGTCACAGTGCTACTTGGAAACACCATATATGTTGACTCTCCTAGAGAAACACTAACAAATGTCCACGTCCCTGCAGAAGGATATAGCTTTCCTGTAAAATTCAGGGAGAATACGTTTGTGAACGGAAACAGGAACTCATTCAACTGCCAAGTAGACCCTCCATTTATAGGATATGCAAAGCCATGGGTGGATCTTGACAGTGGAGACGCTCGTTGTCTTTTCTTCCCATACTCACCGGAGCATCTGGTTCACTCCATGTCTAGATCAAAAGACACGAAACCGCATGTGTCCTTCTCCATTAATGCTTCAGTCAAAGAAGGTCGACATGTGTCGGGATCTGCGTCTGCACTTCTTATTGGAGGGTTTTCTGTAGCATGGCCAAACAAGTTGAATATAAACCCGGATTCAAACAAGACTACAATTTCAGTACAAGGGAACACCGATGTTCAAATTCACTGGCAAAGCAAAGCAAGGTTATCGATCAGCTTGATCAAGAGAGAAGATTATGGTATCGCAGGGCGTGCACTATACGAGGTGAATGTGCTTAATAGATCAGAGCAATTCACAGATATAATATTCATCACTCTCCCTGCTACTGGCCAAAGTGTAGAAATCGATTTCTCTTATGATACGGGTGAATCCTTAGTAGCGCCATCTGTGAGAAAAGATGGATACCTGTTTAAGATACTATGGGGTGTTTTAGTGGTGATTGTATCGGTGATCATCTTGATGAAAGTGATAGATAGACCAATTGGTCCAGCTGGGGCCACTAGAGTTGCAACAAACGGTGTAGCAGCAACAGCAGGAGCACCGGGAACACCAGAAAGAAGAAGTGGTGCAGTGATATACCATGAGGAATCTCCAAGAACACCATCACCATTTATGGAGTATGTCAAGAGGACTGTGGATGAGACTCCTTACTACAGAAGAGAAGGGAGGAGGAGGTTTAATCCTCAAAACACTATGTAG

Protein:   MVRISSCFFVVVLVLLSIRETSSQLGSGPHITDVNILLPPRMKNPVEYRLQGSDGCFKWSWDHHDILSVTPEFNSSSHCSTSARLKSISPYSGRKETAVYATDIQTGMVIRCKVFIDNFSRIQIFHNSIKLDLDGLSMLRVRAFDNEDNEFSSLVGLQFMWKLMPESGGTTHHLAHVPLKESPLTDCGGLCGYLDIQKKLEDSGVFADLFVVKGTKIGHEKVSVHLLEAPLTHIADEIVLTVAEAMSLEPRSPVYVLMGASFGYTLKVMRGNVPQAVQLPSSHHRWSALNSSVVQVDSLIGLTKALSLGVTTVVVEDTRVAGHIQGSSINVVTPDAFILYISPWSTSGDPTTESKSFPSSMHWYVVSGRQYLMQMKIFSGRPDAHEIYITEKDDIKLYGEETDYWKIVSVPDDLSSEYGWRNSRILKAISPGLGELTAALTYFNGHQNSKEVLKVVQDIVVCEKVQFTLNSEDDTPKILLPWTPAVYQEMELIVTGGCAKASSDYKWFTSDVSILSVSAYGIIQAKRPGIATVKVVSTFDSQNFDEVIVEVSIPSSMVMLQYFPVETVVGSHLQAAVTMKALNGASFSRCDAFNSLIKWKTGSDSFVIVNATAEMMILEELRSTESSPPCSRAYIYTSSPGRTVLQATLAKEFHYFDKSLSESIDLKATLSIGAYLPLTIRQDSDGNHHGGYWFDKTREETDIGVSNLYLVPGTYVDVMLLGGPERWDDNVEFTETVTKVNEDEEDLTNGDNIHHNFDHHANVFRVSCQTLGSYKLVFQRGNLVGVDHPLPAVAEAFLSVQCSLPSSVVLIVDEPVNKLSVIRAASQAERAPGRLRLTPVTVANGQIIRVAAVGISDSGEAFSNSSTLSLRWELSSCDNLASWDDDYNSKMTKTSWERFLALRNESGLCTVRATVSGIDHSGKPLYSSLLPEVSESTLTDAVRLQLVSTLRVTPEFNLVFLNPNAKVNLSMTGGSCLWEAVVNDSRVAEVIRPPSGLQCSQMTLSPKGLGTTLVTVYDIGVSPPLSALAVIKVADIDWIKIASGDEISIMEGSTHSIDLLTGIDDGTTFDSSQYPLMDIMVHIEDDLAEHVSVDDNPLSVGEHVATSSFKVAARRLGITTLYVSARQQSGDKVVSQTIKLEVYAPPRLHPQGIFLVPGASYVLTVKGGPTMNVSVDYTTVDNQVAEIEKSGRLYATSPGNTTIYAKIYGSEGTVVCEAVGNAEVGVPAAATLIAQSDTVAVGREMPIFPSFSQVDLLSFYELCRAYRWTIEDEEVLSFHVPSIDVEENAGFVNVVQGRSAGKTRVTIAFSCDFVSPGFYSESRTYEASIVLSVVPDLPLSLGVPMTWVLPPFYTSSSLLPSSPETPKHKDGQSHRGNVVYSLLKDCSSRADVERDTISINGGSIKTTEINNVACIQAKDRTSGRIEIAACVRVAEVAQIRMKSEMIPFHVVDLAVGGELELPINYYDTLGIGFLEAHGVTTYNVETNHRDVVSIKTVNDQTSVYIKGIKHGKALIRVSIGGNLRKADYVLVSVGAHIHPQKPVIHTGNMLNFSVTGADHQVSGQWVSSNRSVLSVNAVSGQAKAIGQGSAHVTFEGHGLKLQTKVTVLLGNTIYVDSPRETLTNVHVPAEGYSFPVKFRENTFVNGNRNSFNCQVDPPFIGYAKPWVDLDSGDARCLFFPYSPEHLVHSMSRSKDTKPHVSFSINASVKEGRHVSGSASALLIGGFSVAWPNKLNINPDSNKTTISVQGNTDVQIHWQSKARLSISLIKREDYGIAGRALYEVNVLNRSEQFTDIIFITLPATGQSVEIDFSYDTGESLVAPSVRKDGYLFKILWGVLVVIVSVIILMKVIDRPIGPAGATRVATNGVAATAGAPGTPERRSGAVIYHEESPRTPSPFMEYVKRTVDETPYYRREGRRRFNPQNTM